Cluster: ShaoY_2019_ERR3406283_bin.5_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406283_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406283_bin.5_k141_26312 | ShaoY_2019_ERR3406283_bin.5_k141_26312_87 | 97101 | 99419 | + | 3.A.7.7.1 |
| STP | ShaoY_2019_ERR3406283_bin.5_k141_26312 | ShaoY_2019_ERR3406283_bin.5_k141_26312_88 | 99412 | 100728 | + | Pyr_redox_2 |
| pfam | ShaoY_2019_ERR3406283_bin.5_k141_26312 | ShaoY_2019_ERR3406283_bin.5_k141_26312_89 | 100841 | 101668 | - | LGT |
| CAZyme | ShaoY_2019_ERR3406283_bin.5_k141_26312 | ShaoY_2019_ERR3406283_bin.5_k141_26312_90 | 101800 | 103419 | + | GH18 |
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_26312_87
Type: TC
Location: 97101 - 99419 (+)
Type: TC
Location: 97101 - 99419 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_26312_88
Type: STP
Location: 99412 - 100728 (+)
Type: STP
Location: 99412 - 100728 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_26312_89
Type: pfam
Location: 100841 - 101668 (-)
Type: pfam
Location: 100841 - 101668 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_26312_90
Type: CAZyme
Location: 101800 - 103419 (+)
Type: CAZyme
Location: 101800 - 103419 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.