dbCAN HGM

Cluster: ShaoY_2019_ERR3406275_bin.12_CGC3

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ShaoY_2019_ERR3406275_bin.12_k141_5765	ShaoY_2019_ERR3406275_bin.12_k141_5765_96	96420	97346	-	CE7
TC	ShaoY_2019_ERR3406275_bin.12_k141_5765	ShaoY_2019_ERR3406275_bin.12_k141_5765_97	97478	98305	-	3.A.1.5.27
TC	ShaoY_2019_ERR3406275_bin.12_k141_5765	ShaoY_2019_ERR3406275_bin.12_k141_5765_98	98306	100321	-	3.A.1.5.25
TC	ShaoY_2019_ERR3406275_bin.12_k141_5765	ShaoY_2019_ERR3406275_bin.12_k141_5765_99	100325	101281	-	3.A.1.5.38
TC	ShaoY_2019_ERR3406275_bin.12_k141_5765	ShaoY_2019_ERR3406275_bin.12_k141_5765_100	101439	103052	-	3.A.1.5.27
pfam	ShaoY_2019_ERR3406275_bin.12_k141_5765	ShaoY_2019_ERR3406275_bin.12_k141_5765_101	103418	105358	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_2 \| HHH_5 \| UvrC_RNaseH
TC	ShaoY_2019_ERR3406275_bin.12_k141_5765	ShaoY_2019_ERR3406275_bin.12_k141_5765_102	105365	107047	-	2.A.66.4.4

Gene ID: ShaoY_2019_ERR3406275_bin.12_k141_5765_96
Type: CAZyme
Location: 96420 - 97346 (-)

Gene ID: ShaoY_2019_ERR3406275_bin.12_k141_5765_97
Type: TC
Location: 97478 - 98305 (-)

Gene ID: ShaoY_2019_ERR3406275_bin.12_k141_5765_98
Type: TC
Location: 98306 - 100321 (-)

Gene ID: ShaoY_2019_ERR3406275_bin.12_k141_5765_99
Type: TC
Location: 100325 - 101281 (-)

Gene ID: ShaoY_2019_ERR3406275_bin.12_k141_5765_100
Type: TC
Location: 101439 - 103052 (-)

Gene ID: ShaoY_2019_ERR3406275_bin.12_k141_5765_101
Type: pfam
Location: 103418 - 105358 (-)

Gene ID: ShaoY_2019_ERR3406275_bin.12_k141_5765_102
Type: TC
Location: 105365 - 107047 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.