dbCAN HGM

Cluster: ShaoY_2019_ERR3406248_bin.10_CGC1

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ShaoY_2019_ERR3406248_bin.10_k141_1091	ShaoY_2019_ERR3406248_bin.10_k141_1091_1	3	791	-	CE9
STP	ShaoY_2019_ERR3406248_bin.10_k141_1091	ShaoY_2019_ERR3406248_bin.10_k141_1091_2	909	2075	-	SIS \| SIS
TF	ShaoY_2019_ERR3406248_bin.10_k141_1091	ShaoY_2019_ERR3406248_bin.10_k141_1091_3	2190	2921	-	GntR
TC	ShaoY_2019_ERR3406248_bin.10_k141_1091	ShaoY_2019_ERR3406248_bin.10_k141_1091_4	3106	4188	-	4.A.6.1.4
TC	ShaoY_2019_ERR3406248_bin.10_k141_1091	ShaoY_2019_ERR3406248_bin.10_k141_1091_5	4178	4978	-	4.A.6.1.4
TC	ShaoY_2019_ERR3406248_bin.10_k141_1091	ShaoY_2019_ERR3406248_bin.10_k141_1091_6	5069	5551	-	4.A.6.1.4
pfam	ShaoY_2019_ERR3406248_bin.10_k141_1091	ShaoY_2019_ERR3406248_bin.10_k141_1091_7	5588	5869	-	YajC
TC	ShaoY_2019_ERR3406248_bin.10_k141_1091	ShaoY_2019_ERR3406248_bin.10_k141_1091_8	5869	6312	-	4.A.6.1.16

Gene ID: ShaoY_2019_ERR3406248_bin.10_k141_1091_1
Type: CAZyme
Location: 3 - 791 (-)

Gene ID: ShaoY_2019_ERR3406248_bin.10_k141_1091_2
Type: STP
Location: 909 - 2075 (-)

Gene ID: ShaoY_2019_ERR3406248_bin.10_k141_1091_3
Type: TF
Location: 2190 - 2921 (-)

Gene ID: ShaoY_2019_ERR3406248_bin.10_k141_1091_4
Type: TC
Location: 3106 - 4188 (-)

Gene ID: ShaoY_2019_ERR3406248_bin.10_k141_1091_5
Type: TC
Location: 4178 - 4978 (-)

Gene ID: ShaoY_2019_ERR3406248_bin.10_k141_1091_6
Type: TC
Location: 5069 - 5551 (-)

Gene ID: ShaoY_2019_ERR3406248_bin.10_k141_1091_7
Type: pfam
Location: 5588 - 5869 (-)

Gene ID: ShaoY_2019_ERR3406248_bin.10_k141_1091_8
Type: TC
Location: 5869 - 6312 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
ShaoY_2019_ERR3406248_bin.10_k141_1091_7	vegan > omnivore	1.09917	0.00701