Cluster: ShaoY_2019_ERR3406243_bin.1_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406243_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406243_bin.1_k141_6185 | ShaoY_2019_ERR3406243_bin.1_k141_6185_9 | 10479 | 11276 | - | 2.A.102.4.9 |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_6185 | ShaoY_2019_ERR3406243_bin.1_k141_6185_10 | 11287 | 12561 | - | Lar_N | LarA_C |
| TC | ShaoY_2019_ERR3406243_bin.1_k141_6185 | ShaoY_2019_ERR3406243_bin.1_k141_6185_11 | 13083 | 14627 | - | 2.A.49.3.3 |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_6185 | ShaoY_2019_ERR3406243_bin.1_k141_6185_12 | 14809 | 15960 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | ShaoY_2019_ERR3406243_bin.1_k141_6185 | ShaoY_2019_ERR3406243_bin.1_k141_6185_13 | 16102 | 17250 | - | GH3 |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_6185 | ShaoY_2019_ERR3406243_bin.1_k141_6185_14 | 17516 | 17749 | + | Fer2_BFD |
| TC | ShaoY_2019_ERR3406243_bin.1_k141_6185 | ShaoY_2019_ERR3406243_bin.1_k141_6185_15 | 18076 | 18708 | - | 9.B.149.1.11 |
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6185_9
Type: TC
Location: 10479 - 11276 (-)
Type: TC
Location: 10479 - 11276 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6185_10
Type: pfam
Location: 11287 - 12561 (-)
Type: pfam
Location: 11287 - 12561 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6185_11
Type: TC
Location: 13083 - 14627 (-)
Type: TC
Location: 13083 - 14627 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6185_12
Type: pfam
Location: 14809 - 15960 (-)
Type: pfam
Location: 14809 - 15960 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6185_13
Type: CAZyme
Location: 16102 - 17250 (-)
Type: CAZyme
Location: 16102 - 17250 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6185_14
Type: pfam
Location: 17516 - 17749 (+)
Type: pfam
Location: 17516 - 17749 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6185_15
Type: TC
Location: 18076 - 18708 (-)
Type: TC
Location: 18076 - 18708 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.