Cluster: ShaoY_2019_ERR3406243_bin.1_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406243_bin.1
- CGC Family ID: CGCFAM_03168
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406243_bin.1_k141_6035 | ShaoY_2019_ERR3406243_bin.1_k141_6035_3 | 1605 | 2405 | - | GT51 |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_6035 | ShaoY_2019_ERR3406243_bin.1_k141_6035_4 | 2608 | 2886 | + | Trns_repr_metal |
| TC | ShaoY_2019_ERR3406243_bin.1_k141_6035 | ShaoY_2019_ERR3406243_bin.1_k141_6035_5 | 2931 | 3191 | - | 8.A.8.1.1 |
| TC | ShaoY_2019_ERR3406243_bin.1_k141_6035 | ShaoY_2019_ERR3406243_bin.1_k141_6035_6 | 3306 | 5033 | - | 8.A.7.1.1 |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_6035 | ShaoY_2019_ERR3406243_bin.1_k141_6035_7 | 5240 | 6073 | + | DAP_epimerase | DAP_epimerase |
| TC | ShaoY_2019_ERR3406243_bin.1_k141_6035 | ShaoY_2019_ERR3406243_bin.1_k141_6035_8 | 6132 | 7469 | + | 2.A.35.1.2 |
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6035_3
Type: CAZyme
Location: 1605 - 2405 (-)
Type: CAZyme
Location: 1605 - 2405 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6035_4
Type: pfam
Location: 2608 - 2886 (+)
Type: pfam
Location: 2608 - 2886 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6035_5
Type: TC
Location: 2931 - 3191 (-)
Type: TC
Location: 2931 - 3191 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6035_6
Type: TC
Location: 3306 - 5033 (-)
Type: TC
Location: 3306 - 5033 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6035_7
Type: pfam
Location: 5240 - 6073 (+)
Type: pfam
Location: 5240 - 6073 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6035_8
Type: TC
Location: 6132 - 7469 (+)
Type: TC
Location: 6132 - 7469 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.