Cluster: ShaoY_2019_ERR3406243_bin.1_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406243_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406243_bin.1_k141_5881 | ShaoY_2019_ERR3406243_bin.1_k141_5881_6 | 11541 | 13019 | + | GT83 |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_5881 | ShaoY_2019_ERR3406243_bin.1_k141_5881_7 | 13135 | 13503 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_5881 | ShaoY_2019_ERR3406243_bin.1_k141_5881_8 | 13574 | 14080 | - | Ribosomal_L10 |
| TC | ShaoY_2019_ERR3406243_bin.1_k141_5881 | ShaoY_2019_ERR3406243_bin.1_k141_5881_9 | 14256 | 14966 | - | 1.C.82.1.1 |
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_5881_6
Type: CAZyme
Location: 11541 - 13019 (+)
Type: CAZyme
Location: 11541 - 13019 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_5881_7
Type: pfam
Location: 13135 - 13503 (-)
Type: pfam
Location: 13135 - 13503 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_5881_8
Type: pfam
Location: 13574 - 14080 (-)
Type: pfam
Location: 13574 - 14080 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_5881_9
Type: TC
Location: 14256 - 14966 (-)
Type: TC
Location: 14256 - 14966 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.