Cluster: ShaoY_2019_ERR3406243_bin.1_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406243_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406243_bin.1_k141_13059 | ShaoY_2019_ERR3406243_bin.1_k141_13059_10 | 8441 | 10759 | + | 3.A.7.7.1 |
| STP | ShaoY_2019_ERR3406243_bin.1_k141_13059 | ShaoY_2019_ERR3406243_bin.1_k141_13059_11 | 10752 | 12068 | + | Pyr_redox_2 |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_13059 | ShaoY_2019_ERR3406243_bin.1_k141_13059_12 | 12167 | 12994 | - | LGT |
| CAZyme | ShaoY_2019_ERR3406243_bin.1_k141_13059 | ShaoY_2019_ERR3406243_bin.1_k141_13059_13 | 13126 | 14745 | + | GH18 |
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_13059_10
Type: TC
Location: 8441 - 10759 (+)
Type: TC
Location: 8441 - 10759 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_13059_11
Type: STP
Location: 10752 - 12068 (+)
Type: STP
Location: 10752 - 12068 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_13059_12
Type: pfam
Location: 12167 - 12994 (-)
Type: pfam
Location: 12167 - 12994 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_13059_13
Type: CAZyme
Location: 13126 - 14745 (+)
Type: CAZyme
Location: 13126 - 14745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.