Cluster: ShaoY_2019_ERR3406243_bin.1_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3406243_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406243_bin.1_k141_10199 | ShaoY_2019_ERR3406243_bin.1_k141_10199_4 | 3225 | 4577 | - | 3.B.1.1.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406243_bin.1_k141_10199 | ShaoY_2019_ERR3406243_bin.1_k141_10199_5 | 5071 | 5388 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3406243_bin.1_k141_10199 | ShaoY_2019_ERR3406243_bin.1_k141_10199_6 | 5471 | 6550 | - | GT9 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406243_bin.1_k141_10199 | ShaoY_2019_ERR3406243_bin.1_k141_10199_7 | 6721 | 7662 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ShaoY_2019_ERR3406243_bin.1_k141_10199 | ShaoY_2019_ERR3406243_bin.1_k141_10199_8 | 7671 | 8609 | - | NAGPA |
| CAZyme | ShaoY_2019_ERR3406243_bin.1_k141_10199 | ShaoY_2019_ERR3406243_bin.1_k141_10199_9 | 8621 | 9427 | - | CE4 |
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_10199_4
Type: TC
Location: 3225 - 4577 (-)
Type: TC
Location: 3225 - 4577 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_10199_5
Type:
Location: 5071 - 5388 (-)
Type:
Location: 5071 - 5388 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_10199_6
Type: CAZyme
Location: 5471 - 6550 (-)
Type: CAZyme
Location: 5471 - 6550 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_10199_7
Type:
Location: 6721 - 7662 (-)
Type:
Location: 6721 - 7662 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_10199_8
Type: pfam
Location: 7671 - 8609 (-)
Type: pfam
Location: 7671 - 8609 (-)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_10199_9
Type: CAZyme
Location: 8621 - 9427 (-)
Type: CAZyme
Location: 8621 - 9427 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.