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Cluster: ShaoY_2019_ERR3406226_bin.7_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3406226_bin.7_k141_9134 ShaoY_2019_ERR3406226_bin.7_k141_9134_9 10055 13063 + GH2
NULL(UNKNOWN) ShaoY_2019_ERR3406226_bin.7_k141_9134 ShaoY_2019_ERR3406226_bin.7_k141_9134_10 13067 13522 + NULL(UNKNOWN)
[View Structural Homologs]
TC ShaoY_2019_ERR3406226_bin.7_k141_9134 ShaoY_2019_ERR3406226_bin.7_k141_9134_11 13676 15139 + 2.A.3.7.4
STP ShaoY_2019_ERR3406226_bin.7_k141_9134 ShaoY_2019_ERR3406226_bin.7_k141_9134_12 15561 15809 + PTS-HPr
STP ShaoY_2019_ERR3406226_bin.7_k141_9134 ShaoY_2019_ERR3406226_bin.7_k141_9134_13 15998 16240 + FeoA
TC ShaoY_2019_ERR3406226_bin.7_k141_9134 ShaoY_2019_ERR3406226_bin.7_k141_9134_14 16278 16499 + 9.A.8.1.6
TC ShaoY_2019_ERR3406226_bin.7_k141_9134 ShaoY_2019_ERR3406226_bin.7_k141_9134_15 16623 18950 + 9.A.8.1.6
Gene ID: ShaoY_2019_ERR3406226_bin.7_k141_9134_9
Type: CAZyme
Location: 10055 - 13063 (+)
Gene ID: ShaoY_2019_ERR3406226_bin.7_k141_9134_10
Type:
Location: 13067 - 13522 (+)
Gene ID: ShaoY_2019_ERR3406226_bin.7_k141_9134_11
Type: TC
Location: 13676 - 15139 (+)
Gene ID: ShaoY_2019_ERR3406226_bin.7_k141_9134_12
Type: STP
Location: 15561 - 15809 (+)
Gene ID: ShaoY_2019_ERR3406226_bin.7_k141_9134_13
Type: STP
Location: 15998 - 16240 (+)
Gene ID: ShaoY_2019_ERR3406226_bin.7_k141_9134_14
Type: TC
Location: 16278 - 16499 (+)
Gene ID: ShaoY_2019_ERR3406226_bin.7_k141_9134_15
Type: TC
Location: 16623 - 18950 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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