Cluster: ShaoY_2019_ERR3406169_bin.5_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3406169_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406169_bin.5_k141_553 | ShaoY_2019_ERR3406169_bin.5_k141_553_60 | 56665 | 58074 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406169_bin.5_k141_553 | ShaoY_2019_ERR3406169_bin.5_k141_553_61 | 58082 | 59200 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3406169_bin.5_k141_553 | ShaoY_2019_ERR3406169_bin.5_k141_553_62 | 59207 | 59905 | - | GT32 |
| CAZyme | ShaoY_2019_ERR3406169_bin.5_k141_553 | ShaoY_2019_ERR3406169_bin.5_k141_553_63 | 59931 | 60917 | - | GT2 |
| CAZyme | ShaoY_2019_ERR3406169_bin.5_k141_553 | ShaoY_2019_ERR3406169_bin.5_k141_553_64 | 60921 | 61775 | - | GT2 |
| CAZyme | ShaoY_2019_ERR3406169_bin.5_k141_553 | ShaoY_2019_ERR3406169_bin.5_k141_553_65 | 61772 | 62869 | - | GT4 |
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_553_60
Type: TC
Location: 56665 - 58074 (-)
Type: TC
Location: 56665 - 58074 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_553_61
Type:
Location: 58082 - 59200 (-)
Type:
Location: 58082 - 59200 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_553_62
Type: CAZyme
Location: 59207 - 59905 (-)
Type: CAZyme
Location: 59207 - 59905 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_553_63
Type: CAZyme
Location: 59931 - 60917 (-)
Type: CAZyme
Location: 59931 - 60917 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_553_64
Type: CAZyme
Location: 60921 - 61775 (-)
Type: CAZyme
Location: 60921 - 61775 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_553_65
Type: CAZyme
Location: 61772 - 62869 (-)
Type: CAZyme
Location: 61772 - 62869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_Q
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.