Cluster: ShaoY_2019_ERR3406169_bin.5_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3406169_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406169_bin.5_k141_445 | ShaoY_2019_ERR3406169_bin.5_k141_445_93 | 71690 | 72733 | + | GT9 |
| TC | ShaoY_2019_ERR3406169_bin.5_k141_445 | ShaoY_2019_ERR3406169_bin.5_k141_445_94 | 72730 | 73635 | + | 2.A.7.3.58 |
| CAZyme | ShaoY_2019_ERR3406169_bin.5_k141_445 | ShaoY_2019_ERR3406169_bin.5_k141_445_95 | 73632 | 74585 | + | GT9 |
| TC | ShaoY_2019_ERR3406169_bin.5_k141_445 | ShaoY_2019_ERR3406169_bin.5_k141_445_96 | 74751 | 75830 | + | 1.B.1.3.3 |
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_445_93
Type: CAZyme
Location: 71690 - 72733 (+)
Type: CAZyme
Location: 71690 - 72733 (+)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_445_94
Type: TC
Location: 72730 - 73635 (+)
Type: TC
Location: 72730 - 73635 (+)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_445_95
Type: CAZyme
Location: 73632 - 74585 (+)
Type: CAZyme
Location: 73632 - 74585 (+)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_445_96
Type: TC
Location: 74751 - 75830 (+)
Type: TC
Location: 74751 - 75830 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_Q
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.