Cluster: ShaoY_2019_ERR3406169_bin.5_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406169_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406169_bin.5_k141_1672 | ShaoY_2019_ERR3406169_bin.5_k141_1672_73 | 82006 | 83175 | + | GT19 |
| pfam | ShaoY_2019_ERR3406169_bin.5_k141_1672 | ShaoY_2019_ERR3406169_bin.5_k141_1672_74 | 83168 | 83770 | + | RNase_HII |
| TC | ShaoY_2019_ERR3406169_bin.5_k141_1672 | ShaoY_2019_ERR3406169_bin.5_k141_1672_75 | 83806 | 85659 | + | 2.A.47.4.8 |
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_1672_73
Type: CAZyme
Location: 82006 - 83175 (+)
Type: CAZyme
Location: 82006 - 83175 (+)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_1672_74
Type: pfam
Location: 83168 - 83770 (+)
Type: pfam
Location: 83168 - 83770 (+)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_1672_75
Type: TC
Location: 83806 - 85659 (+)
Type: TC
Location: 83806 - 85659 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_Q
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.