Cluster: ShaoY_2019_ERR3406169_bin.5_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406169_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406169_bin.5_k141_932 | ShaoY_2019_ERR3406169_bin.5_k141_932_69 | 81317 | 83695 | - | GH31_2 |
| TC | ShaoY_2019_ERR3406169_bin.5_k141_932 | ShaoY_2019_ERR3406169_bin.5_k141_932_70 | 83713 | 85014 | - | 2.A.56.1.5 |
| TC | ShaoY_2019_ERR3406169_bin.5_k141_932 | ShaoY_2019_ERR3406169_bin.5_k141_932_71 | 85016 | 85531 | - | 2.A.56.1.5 |
| TC | ShaoY_2019_ERR3406169_bin.5_k141_932 | ShaoY_2019_ERR3406169_bin.5_k141_932_72 | 85761 | 86753 | + | 2.A.56.1.5 |
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_932_69
Type: CAZyme
Location: 81317 - 83695 (-)
Type: CAZyme
Location: 81317 - 83695 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_932_70
Type: TC
Location: 83713 - 85014 (-)
Type: TC
Location: 83713 - 85014 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_932_71
Type: TC
Location: 85016 - 85531 (-)
Type: TC
Location: 85016 - 85531 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.5_k141_932_72
Type: TC
Location: 85761 - 86753 (+)
Type: TC
Location: 85761 - 86753 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_Q
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.