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Cluster: ShaoY_2019_ERR3406076_bin.13_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3406076_bin.13_k141_8401 ShaoY_2019_ERR3406076_bin.13_k141_8401_21 26753 29167 - 9.B.144.1.5
TC ShaoY_2019_ERR3406076_bin.13_k141_8401 ShaoY_2019_ERR3406076_bin.13_k141_8401_22 29151 29543 - 4.D.2.1.9
CAZyme ShaoY_2019_ERR3406076_bin.13_k141_8401 ShaoY_2019_ERR3406076_bin.13_k141_8401_23 29544 30119 - GT2
CAZyme ShaoY_2019_ERR3406076_bin.13_k141_8401 ShaoY_2019_ERR3406076_bin.13_k141_8401_24 30125 31087 - GT81
pfam ShaoY_2019_ERR3406076_bin.13_k141_8401 ShaoY_2019_ERR3406076_bin.13_k141_8401_25 31356 33014 + DUF6020
TC ShaoY_2019_ERR3406076_bin.13_k141_8401 ShaoY_2019_ERR3406076_bin.13_k141_8401_26 33104 33949 + 3.A.1.103.6
TC ShaoY_2019_ERR3406076_bin.13_k141_8401 ShaoY_2019_ERR3406076_bin.13_k141_8401_27 33961 34728 + 3.A.1.103.1
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_8401_21
Type: TC
Location: 26753 - 29167 (-)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_8401_22
Type: TC
Location: 29151 - 29543 (-)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_8401_23
Type: CAZyme
Location: 29544 - 30119 (-)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_8401_24
Type: CAZyme
Location: 30125 - 31087 (-)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_8401_25
Type: pfam
Location: 31356 - 33014 (+)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_8401_26
Type: TC
Location: 33104 - 33949 (+)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_8401_27
Type: TC
Location: 33961 - 34728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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