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Cluster: ShaoY_2019_ERR3406076_bin.13_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3406076_bin.13_k141_11385 ShaoY_2019_ERR3406076_bin.13_k141_11385_10 13721 15403 + 2.A.66.4.4
pfam ShaoY_2019_ERR3406076_bin.13_k141_11385 ShaoY_2019_ERR3406076_bin.13_k141_11385_11 15410 17350 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC ShaoY_2019_ERR3406076_bin.13_k141_11385 ShaoY_2019_ERR3406076_bin.13_k141_11385_12 17716 19329 + 3.A.1.5.27
TC ShaoY_2019_ERR3406076_bin.13_k141_11385 ShaoY_2019_ERR3406076_bin.13_k141_11385_13 19487 20443 + 3.A.1.5.38
TC ShaoY_2019_ERR3406076_bin.13_k141_11385 ShaoY_2019_ERR3406076_bin.13_k141_11385_14 20447 22462 + 3.A.1.5.25
TC ShaoY_2019_ERR3406076_bin.13_k141_11385 ShaoY_2019_ERR3406076_bin.13_k141_11385_15 22463 23290 + 3.A.1.5.27
CAZyme ShaoY_2019_ERR3406076_bin.13_k141_11385 ShaoY_2019_ERR3406076_bin.13_k141_11385_16 23422 24348 + CE7
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_11385_10
Type: TC
Location: 13721 - 15403 (+)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_11385_11
Type: pfam
Location: 15410 - 17350 (+)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_11385_12
Type: TC
Location: 17716 - 19329 (+)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_11385_13
Type: TC
Location: 19487 - 20443 (+)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_11385_14
Type: TC
Location: 20447 - 22462 (+)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_11385_15
Type: TC
Location: 22463 - 23290 (+)
Gene ID: ShaoY_2019_ERR3406076_bin.13_k141_11385_16
Type: CAZyme
Location: 23422 - 24348 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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