dbCAN HGM

Cluster: ShaoY_2019_ERR3406052_bin.4_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ShaoY_2019_ERR3406052_bin.4_k141_555	ShaoY_2019_ERR3406052_bin.4_k141_555_20	23912	24838	-	CE7
TC	ShaoY_2019_ERR3406052_bin.4_k141_555	ShaoY_2019_ERR3406052_bin.4_k141_555_21	24970	25797	-	3.A.1.5.27
TC	ShaoY_2019_ERR3406052_bin.4_k141_555	ShaoY_2019_ERR3406052_bin.4_k141_555_22	25798	27813	-	3.A.1.5.25
TC	ShaoY_2019_ERR3406052_bin.4_k141_555	ShaoY_2019_ERR3406052_bin.4_k141_555_23	27817	28773	-	3.A.1.5.38
TC	ShaoY_2019_ERR3406052_bin.4_k141_555	ShaoY_2019_ERR3406052_bin.4_k141_555_24	28931	30544	-	3.A.1.5.27
pfam	ShaoY_2019_ERR3406052_bin.4_k141_555	ShaoY_2019_ERR3406052_bin.4_k141_555_25	30910	32850	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_2 \| HHH_5 \| UvrC_RNaseH
TC	ShaoY_2019_ERR3406052_bin.4_k141_555	ShaoY_2019_ERR3406052_bin.4_k141_555_26	32857	34539	-	2.A.66.4.4

Gene ID: ShaoY_2019_ERR3406052_bin.4_k141_555_20
Type: CAZyme
Location: 23912 - 24838 (-)

Gene ID: ShaoY_2019_ERR3406052_bin.4_k141_555_21
Type: TC
Location: 24970 - 25797 (-)

Gene ID: ShaoY_2019_ERR3406052_bin.4_k141_555_22
Type: TC
Location: 25798 - 27813 (-)

Gene ID: ShaoY_2019_ERR3406052_bin.4_k141_555_23
Type: TC
Location: 27817 - 28773 (-)

Gene ID: ShaoY_2019_ERR3406052_bin.4_k141_555_24
Type: TC
Location: 28931 - 30544 (-)

Gene ID: ShaoY_2019_ERR3406052_bin.4_k141_555_25
Type: pfam
Location: 30910 - 32850 (-)

Gene ID: ShaoY_2019_ERR3406052_bin.4_k141_555_26
Type: TC
Location: 32857 - 34539 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.