Cluster: ShaoY_2019_ERR3405993_bin.7_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405993_bin.7
- CGC Family ID: CGCFAM_10528
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405993_bin.7_k141_5581 | ShaoY_2019_ERR3405993_bin.7_k141_5581_12 | 12983 | 14287 | - | GH125 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405993_bin.7_k141_5581 | ShaoY_2019_ERR3405993_bin.7_k141_5581_13 | 14482 | 15732 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405993_bin.7_k141_5581 | ShaoY_2019_ERR3405993_bin.7_k141_5581_14 | 15848 | 17194 | - | 2.A.66.1.23 |
| TF | ShaoY_2019_ERR3405993_bin.7_k141_5581 | ShaoY_2019_ERR3405993_bin.7_k141_5581_15 | 17382 | 18269 | - | HTH_1 |
| pfam | ShaoY_2019_ERR3405993_bin.7_k141_5581 | ShaoY_2019_ERR3405993_bin.7_k141_5581_16 | 18381 | 18947 | + | Chromate_transp |
| TC | ShaoY_2019_ERR3405993_bin.7_k141_5581 | ShaoY_2019_ERR3405993_bin.7_k141_5581_17 | 18944 | 19492 | + | 2.A.51.1.5 |
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_5581_12
Type: CAZyme
Location: 12983 - 14287 (-)
Type: CAZyme
Location: 12983 - 14287 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_5581_13
Type:
Location: 14482 - 15732 (-)
Type:
Location: 14482 - 15732 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_5581_14
Type: TC
Location: 15848 - 17194 (-)
Type: TC
Location: 15848 - 17194 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_5581_15
Type: TF
Location: 17382 - 18269 (-)
Type: TF
Location: 17382 - 18269 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_5581_16
Type: pfam
Location: 18381 - 18947 (+)
Type: pfam
Location: 18381 - 18947 (+)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_5581_17
Type: TC
Location: 18944 - 19492 (+)
Type: TC
Location: 18944 - 19492 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.