Cluster: ShaoY_2019_ERR3405993_bin.7_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405993_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405993_bin.7_k141_25021 | ShaoY_2019_ERR3405993_bin.7_k141_25021_6 | 3002 | 4198 | - | GH18 |
| pfam | ShaoY_2019_ERR3405993_bin.7_k141_25021 | ShaoY_2019_ERR3405993_bin.7_k141_25021_7 | 4202 | 5071 | - | Aldose_epim |
| pfam | ShaoY_2019_ERR3405993_bin.7_k141_25021 | ShaoY_2019_ERR3405993_bin.7_k141_25021_8 | 5082 | 5855 | - | Antibiotic_NAT |
| CAZyme | ShaoY_2019_ERR3405993_bin.7_k141_25021 | ShaoY_2019_ERR3405993_bin.7_k141_25021_9 | 5956 | 7980 | - | CBM67 | GH78 |
| TC | ShaoY_2019_ERR3405993_bin.7_k141_25021 | ShaoY_2019_ERR3405993_bin.7_k141_25021_10 | 8238 | 8801 | + | 2.A.107.1.2 |
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_25021_6
Type: CAZyme
Location: 3002 - 4198 (-)
Type: CAZyme
Location: 3002 - 4198 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_25021_7
Type: pfam
Location: 4202 - 5071 (-)
Type: pfam
Location: 4202 - 5071 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_25021_8
Type: pfam
Location: 5082 - 5855 (-)
Type: pfam
Location: 5082 - 5855 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_25021_9
Type: CAZyme
Location: 5956 - 7980 (-)
Type: CAZyme
Location: 5956 - 7980 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_25021_10
Type: TC
Location: 8238 - 8801 (+)
Type: TC
Location: 8238 - 8801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.