Cluster: ShaoY_2019_ERR3405993_bin.7_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405993_bin.7
- CGC Family ID: CGCFAM_06268
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405993_bin.7_k141_20747 | ShaoY_2019_ERR3405993_bin.7_k141_20747_8 | 6028 | 7992 | - | GH13_39 |
| pfam | ShaoY_2019_ERR3405993_bin.7_k141_20747 | ShaoY_2019_ERR3405993_bin.7_k141_20747_9 | 8003 | 8626 | - | SSB |
| pfam | ShaoY_2019_ERR3405993_bin.7_k141_20747 | ShaoY_2019_ERR3405993_bin.7_k141_20747_10 | 8681 | 9241 | - | DUF3267 |
| CAZyme | ShaoY_2019_ERR3405993_bin.7_k141_20747 | ShaoY_2019_ERR3405993_bin.7_k141_20747_11 | 9359 | 10165 | - | CE4 |
| TC | ShaoY_2019_ERR3405993_bin.7_k141_20747 | ShaoY_2019_ERR3405993_bin.7_k141_20747_12 | 10322 | 11209 | + | 3.A.1.3.27 |
| TC | ShaoY_2019_ERR3405993_bin.7_k141_20747 | ShaoY_2019_ERR3405993_bin.7_k141_20747_13 | 11297 | 11938 | + | 3.A.1.3.10 |
| TC | ShaoY_2019_ERR3405993_bin.7_k141_20747 | ShaoY_2019_ERR3405993_bin.7_k141_20747_14 | 11954 | 12721 | + | 3.A.1.3.6 |
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_20747_8
Type: CAZyme
Location: 6028 - 7992 (-)
Type: CAZyme
Location: 6028 - 7992 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_20747_9
Type: pfam
Location: 8003 - 8626 (-)
Type: pfam
Location: 8003 - 8626 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_20747_10
Type: pfam
Location: 8681 - 9241 (-)
Type: pfam
Location: 8681 - 9241 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_20747_11
Type: CAZyme
Location: 9359 - 10165 (-)
Type: CAZyme
Location: 9359 - 10165 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_20747_12
Type: TC
Location: 10322 - 11209 (+)
Type: TC
Location: 10322 - 11209 (+)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_20747_13
Type: TC
Location: 11297 - 11938 (+)
Type: TC
Location: 11297 - 11938 (+)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_20747_14
Type: TC
Location: 11954 - 12721 (+)
Type: TC
Location: 11954 - 12721 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.