Cluster: ShaoY_2019_ERR3405993_bin.7_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405993_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405993_bin.7_k141_10976 | ShaoY_2019_ERR3405993_bin.7_k141_10976_3 | 2610 | 4934 | - | CBM67 | GH78 |
| pfam | ShaoY_2019_ERR3405993_bin.7_k141_10976 | ShaoY_2019_ERR3405993_bin.7_k141_10976_4 | 4991 | 5935 | - | DHDPS |
| STP | ShaoY_2019_ERR3405993_bin.7_k141_10976 | ShaoY_2019_ERR3405993_bin.7_k141_10976_5 | 6152 | 7294 | - | Pyr_redox_2 |
| TC | ShaoY_2019_ERR3405993_bin.7_k141_10976 | ShaoY_2019_ERR3405993_bin.7_k141_10976_6 | 7513 | 7947 | + | 3.A.1.25.2 |
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_10976_3
Type: CAZyme
Location: 2610 - 4934 (-)
Type: CAZyme
Location: 2610 - 4934 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_10976_4
Type: pfam
Location: 4991 - 5935 (-)
Type: pfam
Location: 4991 - 5935 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_10976_5
Type: STP
Location: 6152 - 7294 (-)
Type: STP
Location: 6152 - 7294 (-)
Gene ID: ShaoY_2019_ERR3405993_bin.7_k141_10976_6
Type: TC
Location: 7513 - 7947 (+)
Type: TC
Location: 7513 - 7947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.