Cluster: ShaoY_2019_ERR3405990_bin.18_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405990_bin.18
- CGC Family ID: CGCFAM_02148
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405990_bin.18_k141_20705 | ShaoY_2019_ERR3405990_bin.18_k141_20705_11 | 9042 | 9782 | + | 1.C.113.1.1 |
| CAZyme | ShaoY_2019_ERR3405990_bin.18_k141_20705 | ShaoY_2019_ERR3405990_bin.18_k141_20705_12 | 9900 | 10775 | + | CE4 |
| pfam | ShaoY_2019_ERR3405990_bin.18_k141_20705 | ShaoY_2019_ERR3405990_bin.18_k141_20705_13 | 10834 | 11571 | + | Amidase_3 | SH3_3 |
| TC | ShaoY_2019_ERR3405990_bin.18_k141_20705 | ShaoY_2019_ERR3405990_bin.18_k141_20705_14 | 11705 | 14092 | - | 3.A.3.23.2 |
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_20705_11
Type: TC
Location: 9042 - 9782 (+)
Type: TC
Location: 9042 - 9782 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_20705_12
Type: CAZyme
Location: 9900 - 10775 (+)
Type: CAZyme
Location: 9900 - 10775 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_20705_13
Type: pfam
Location: 10834 - 11571 (+)
Type: pfam
Location: 10834 - 11571 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_20705_14
Type: TC
Location: 11705 - 14092 (-)
Type: TC
Location: 11705 - 14092 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.