Cluster: ShaoY_2019_ERR3405990_bin.18_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405990_bin.18
- CGC Family ID: CGCFAM_00041
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405990_bin.18_k141_22955 | ShaoY_2019_ERR3405990_bin.18_k141_22955_14 | 11573 | 12424 | + | 3.A.1.1.11 |
| TC | ShaoY_2019_ERR3405990_bin.18_k141_22955 | ShaoY_2019_ERR3405990_bin.18_k141_22955_15 | 12438 | 13298 | + | 3.A.1.1.11 |
| pfam | ShaoY_2019_ERR3405990_bin.18_k141_22955 | ShaoY_2019_ERR3405990_bin.18_k141_22955_16 | 13329 | 13760 | + | RDD |
| CAZyme | ShaoY_2019_ERR3405990_bin.18_k141_22955 | ShaoY_2019_ERR3405990_bin.18_k141_22955_17 | 13760 | 15298 | + | GH28 |
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_22955_14
Type: TC
Location: 11573 - 12424 (+)
Type: TC
Location: 11573 - 12424 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_22955_15
Type: TC
Location: 12438 - 13298 (+)
Type: TC
Location: 12438 - 13298 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_22955_16
Type: pfam
Location: 13329 - 13760 (+)
Type: pfam
Location: 13329 - 13760 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_22955_17
Type: CAZyme
Location: 13760 - 15298 (+)
Type: CAZyme
Location: 13760 - 15298 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.