Cluster: ShaoY_2019_ERR3405990_bin.18_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405990_bin.18
- CGC Family ID: CGCFAM_00528
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405990_bin.18_k141_21080 | ShaoY_2019_ERR3405990_bin.18_k141_21080_17 | 11511 | 12278 | + | 3.A.1.134.4 |
| TC | ShaoY_2019_ERR3405990_bin.18_k141_21080 | ShaoY_2019_ERR3405990_bin.18_k141_21080_18 | 12271 | 14253 | + | 3.A.1.134.4 |
| CAZyme | ShaoY_2019_ERR3405990_bin.18_k141_21080 | ShaoY_2019_ERR3405990_bin.18_k141_21080_19 | 14659 | 17262 | + | CE4 |
| CAZyme | ShaoY_2019_ERR3405990_bin.18_k141_21080 | ShaoY_2019_ERR3405990_bin.18_k141_21080_20 | 17311 | 19497 | + | GT2 |
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_21080_17
Type: TC
Location: 11511 - 12278 (+)
Type: TC
Location: 11511 - 12278 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_21080_18
Type: TC
Location: 12271 - 14253 (+)
Type: TC
Location: 12271 - 14253 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_21080_19
Type: CAZyme
Location: 14659 - 17262 (+)
Type: CAZyme
Location: 14659 - 17262 (+)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_21080_20
Type: CAZyme
Location: 17311 - 19497 (+)
Type: CAZyme
Location: 17311 - 19497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.