Cluster: ShaoY_2019_ERR3405990_bin.18_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405990_bin.18
- CGC Family ID: CGCFAM_02149
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405990_bin.18_k141_1326 | ShaoY_2019_ERR3405990_bin.18_k141_1326_1 | 1 | 726 | - | 3.A.1.4.10 |
| TC | ShaoY_2019_ERR3405990_bin.18_k141_1326 | ShaoY_2019_ERR3405990_bin.18_k141_1326_2 | 809 | 1978 | - | 3.A.1.4.10 |
| pfam | ShaoY_2019_ERR3405990_bin.18_k141_1326 | ShaoY_2019_ERR3405990_bin.18_k141_1326_3 | 2715 | 3380 | - | Methyltransf_4 | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | ShaoY_2019_ERR3405990_bin.18_k141_1326 | ShaoY_2019_ERR3405990_bin.18_k141_1326_4 | 3525 | 4334 | - | CE4 |
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_1326_1
Type: TC
Location: 1 - 726 (-)
Type: TC
Location: 1 - 726 (-)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_1326_2
Type: TC
Location: 809 - 1978 (-)
Type: TC
Location: 809 - 1978 (-)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_1326_3
Type: pfam
Location: 2715 - 3380 (-)
Type: pfam
Location: 2715 - 3380 (-)
Gene ID: ShaoY_2019_ERR3405990_bin.18_k141_1326_4
Type: CAZyme
Location: 3525 - 4334 (-)
Type: CAZyme
Location: 3525 - 4334 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.