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Cluster: ShaoY_2019_ERR3405984_bin.12_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405984_bin.12_k141_19925 ShaoY_2019_ERR3405984_bin.12_k141_19925_112 129030 129737 + 9.B.18.1.2
CAZyme ShaoY_2019_ERR3405984_bin.12_k141_19925 ShaoY_2019_ERR3405984_bin.12_k141_19925_113 129738 130571 + GT2
CAZyme ShaoY_2019_ERR3405984_bin.12_k141_19925 ShaoY_2019_ERR3405984_bin.12_k141_19925_114 130576 131568 + GT2
pfam ShaoY_2019_ERR3405984_bin.12_k141_19925 ShaoY_2019_ERR3405984_bin.12_k141_19925_115 131763 132878 + EpsG
CAZyme ShaoY_2019_ERR3405984_bin.12_k141_19925 ShaoY_2019_ERR3405984_bin.12_k141_19925_116 132871 133866 + GT2
CAZyme ShaoY_2019_ERR3405984_bin.12_k141_19925 ShaoY_2019_ERR3405984_bin.12_k141_19925_117 134267 135430 + GT2
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_19925_112
Type: TC
Location: 129030 - 129737 (+)
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_19925_113
Type: CAZyme
Location: 129738 - 130571 (+)
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_19925_114
Type: CAZyme
Location: 130576 - 131568 (+)
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_19925_115
Type: pfam
Location: 131763 - 132878 (+)
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_19925_116
Type: CAZyme
Location: 132871 - 133866 (+)
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_19925_117
Type: CAZyme
Location: 134267 - 135430 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
ShaoY_2019_ERR3405984_bin.12_k141_19925_112 vegan > omnivore 1.31098 0.00566

🧭 Explore Read Mapping of CGC

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