Cluster: ShaoY_2019_ERR3405984_bin.12_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405984_bin.12
- CGC Family ID: CGCFAM_00618
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405984_bin.12_k141_15521 | ShaoY_2019_ERR3405984_bin.12_k141_15521_5 | 2534 | 3598 | - | 9.B.183.1.6 |
| CAZyme | ShaoY_2019_ERR3405984_bin.12_k141_15521 | ShaoY_2019_ERR3405984_bin.12_k141_15521_6 | 3595 | 4449 | - | GT2 |
| CAZyme | ShaoY_2019_ERR3405984_bin.12_k141_15521 | ShaoY_2019_ERR3405984_bin.12_k141_15521_7 | 4449 | 5600 | - | GT2 |
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_15521_5
Type: TC
Location: 2534 - 3598 (-)
Type: TC
Location: 2534 - 3598 (-)
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_15521_6
Type: CAZyme
Location: 3595 - 4449 (-)
Type: CAZyme
Location: 3595 - 4449 (-)
Gene ID: ShaoY_2019_ERR3405984_bin.12_k141_15521_7
Type: CAZyme
Location: 4449 - 5600 (-)
Type: CAZyme
Location: 4449 - 5600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp938045065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.