dbCAN HGM

Cluster: ShaoY_2019_ERR3405930_bin.6_CGC8

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ShaoY_2019_ERR3405930_bin.6_k141_19240	ShaoY_2019_ERR3405930_bin.6_k141_19240_11	10828	11754	-	CE7
TC	ShaoY_2019_ERR3405930_bin.6_k141_19240	ShaoY_2019_ERR3405930_bin.6_k141_19240_12	11886	12713	-	3.A.1.5.27
TC	ShaoY_2019_ERR3405930_bin.6_k141_19240	ShaoY_2019_ERR3405930_bin.6_k141_19240_13	12714	14729	-	3.A.1.5.25
TC	ShaoY_2019_ERR3405930_bin.6_k141_19240	ShaoY_2019_ERR3405930_bin.6_k141_19240_14	14733	15689	-	3.A.1.5.38
TC	ShaoY_2019_ERR3405930_bin.6_k141_19240	ShaoY_2019_ERR3405930_bin.6_k141_19240_15	15847	17460	-	3.A.1.5.27
pfam	ShaoY_2019_ERR3405930_bin.6_k141_19240	ShaoY_2019_ERR3405930_bin.6_k141_19240_16	17825	19765	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_2 \| HHH_5 \| UvrC_RNaseH
TC	ShaoY_2019_ERR3405930_bin.6_k141_19240	ShaoY_2019_ERR3405930_bin.6_k141_19240_17	19772	21454	-	2.A.66.4.4

Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_19240_11
Type: CAZyme
Location: 10828 - 11754 (-)

Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_19240_12
Type: TC
Location: 11886 - 12713 (-)

Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_19240_13
Type: TC
Location: 12714 - 14729 (-)

Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_19240_14
Type: TC
Location: 14733 - 15689 (-)

Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_19240_15
Type: TC
Location: 15847 - 17460 (-)

Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_19240_16
Type: pfam
Location: 17825 - 19765 (-)

Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_19240_17
Type: TC
Location: 19772 - 21454 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.