dbCAN Logo

Cluster: ShaoY_2019_ERR3405930_bin.6_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405930_bin.6_k141_17444 ShaoY_2019_ERR3405930_bin.6_k141_17444_1 1 384 - 2.A.2.2.1
peptidase ShaoY_2019_ERR3405930_bin.6_k141_17444 ShaoY_2019_ERR3405930_bin.6_k141_17444_2 629 1531 + S09.UPW
TC ShaoY_2019_ERR3405930_bin.6_k141_17444 ShaoY_2019_ERR3405930_bin.6_k141_17444_3 1716 4073 + 9.A.8.1.6
pfam ShaoY_2019_ERR3405930_bin.6_k141_17444 ShaoY_2019_ERR3405930_bin.6_k141_17444_4 4168 4647 + tRNA_edit
TC ShaoY_2019_ERR3405930_bin.6_k141_17444 ShaoY_2019_ERR3405930_bin.6_k141_17444_5 4754 5950 + 2.A.1.2.18
CAZyme ShaoY_2019_ERR3405930_bin.6_k141_17444 ShaoY_2019_ERR3405930_bin.6_k141_17444_6 6104 7480 + GH13_20
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_17444_1
Type: TC
Location: 1 - 384 (-)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_17444_2
Type: peptidase
Location: 629 - 1531 (+)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_17444_3
Type: TC
Location: 1716 - 4073 (+)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_17444_4
Type: pfam
Location: 4168 - 4647 (+)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_17444_5
Type: TC
Location: 4754 - 5950 (+)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_17444_6
Type: CAZyme
Location: 6104 - 7480 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List