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Cluster: ShaoY_2019_ERR3405930_bin.6_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405930_bin.6_k141_575 ShaoY_2019_ERR3405930_bin.6_k141_575_6 7948 9453 + GH77
CAZyme ShaoY_2019_ERR3405930_bin.6_k141_575 ShaoY_2019_ERR3405930_bin.6_k141_575_7 9582 11849 + GT35
TC ShaoY_2019_ERR3405930_bin.6_k141_575 ShaoY_2019_ERR3405930_bin.6_k141_575_8 12306 13505 - 3.A.1.1.22
TC ShaoY_2019_ERR3405930_bin.6_k141_575 ShaoY_2019_ERR3405930_bin.6_k141_575_9 13574 14413 - 3.A.1.1.45
TC ShaoY_2019_ERR3405930_bin.6_k141_575 ShaoY_2019_ERR3405930_bin.6_k141_575_10 14413 15267 - 3.A.1.1.45
TC ShaoY_2019_ERR3405930_bin.6_k141_575 ShaoY_2019_ERR3405930_bin.6_k141_575_11 15355 16671 - 3.A.1.1.45
TF ShaoY_2019_ERR3405930_bin.6_k141_575 ShaoY_2019_ERR3405930_bin.6_k141_575_12 16978 17697 - GntR
TC ShaoY_2019_ERR3405930_bin.6_k141_575 ShaoY_2019_ERR3405930_bin.6_k141_575_13 17927 20377 + 4.A.1.1.8
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_575_6
Type: CAZyme
Location: 7948 - 9453 (+)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_575_7
Type: CAZyme
Location: 9582 - 11849 (+)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_575_8
Type: TC
Location: 12306 - 13505 (-)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_575_9
Type: TC
Location: 13574 - 14413 (-)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_575_10
Type: TC
Location: 14413 - 15267 (-)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_575_11
Type: TC
Location: 15355 - 16671 (-)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_575_12
Type: TF
Location: 16978 - 17697 (-)
Gene ID: ShaoY_2019_ERR3405930_bin.6_k141_575_13
Type: TC
Location: 17927 - 20377 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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