dbCAN Logo

Cluster: ShaoY_2019_ERR3405919_bin.15_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_26 24572 26452 + 9.B.18.2.1
pfam ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_27 26472 27665 + Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
TC ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_28 27676 28356 + 9.B.18.1.3
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_29 28367 29362 + GT2
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_30 29367 30443 + GT4
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_26
Type: TC
Location: 24572 - 26452 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_27
Type: pfam
Location: 26472 - 27665 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_28
Type: TC
Location: 27676 - 28356 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_29
Type: CAZyme
Location: 28367 - 29362 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_30
Type: CAZyme
Location: 29367 - 30443 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List