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Cluster: ShaoY_2019_ERR3405919_bin.15_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_14 11303 12457 + CE9
pfam ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_15 12471 13622 + F_bP_aldolase
TC ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_16 13870 14664 + 3.A.1.17.1
TC ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_17 14640 15431 + 3.A.1.16.2
TC ShaoY_2019_ERR3405919_bin.15_k141_11499 ShaoY_2019_ERR3405919_bin.15_k141_11499_18 15502 16554 + 3.A.1.17.2
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_14
Type: CAZyme
Location: 11303 - 12457 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_15
Type: pfam
Location: 12471 - 13622 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_16
Type: TC
Location: 13870 - 14664 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_17
Type: TC
Location: 14640 - 15431 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_11499_18
Type: TC
Location: 15502 - 16554 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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