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Cluster: ShaoY_2019_ERR3405919_bin.15_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_8806 ShaoY_2019_ERR3405919_bin.15_k141_8806_6 2636 3721 + GH32
STP ShaoY_2019_ERR3405919_bin.15_k141_8806 ShaoY_2019_ERR3405919_bin.15_k141_8806_7 3734 4486 + PfkB
NULL(UNKNOWN) ShaoY_2019_ERR3405919_bin.15_k141_8806 ShaoY_2019_ERR3405919_bin.15_k141_8806_8 4535 4708 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_8806 ShaoY_2019_ERR3405919_bin.15_k141_8806_9 4729 6084 + GH91
TC ShaoY_2019_ERR3405919_bin.15_k141_8806 ShaoY_2019_ERR3405919_bin.15_k141_8806_10 6188 8053 - 3.A.1.111.2
TC ShaoY_2019_ERR3405919_bin.15_k141_8806 ShaoY_2019_ERR3405919_bin.15_k141_8806_11 8043 9866 - 3.A.1.111.2
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_8806_6
Type: CAZyme
Location: 2636 - 3721 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_8806_7
Type: STP
Location: 3734 - 4486 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_8806_8
Type:
Location: 4535 - 4708 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_8806_9
Type: CAZyme
Location: 4729 - 6084 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_8806_10
Type: TC
Location: 6188 - 8053 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_8806_11
Type: TC
Location: 8043 - 9866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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