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Cluster: ShaoY_2019_ERR3405919_bin.15_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405919_bin.15_k141_28025 ShaoY_2019_ERR3405919_bin.15_k141_28025_102 102584 103489 - 1.A.23.2.1
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_28025 ShaoY_2019_ERR3405919_bin.15_k141_28025_103 103486 105777 - CBM48 | GH13_9
TC ShaoY_2019_ERR3405919_bin.15_k141_28025 ShaoY_2019_ERR3405919_bin.15_k141_28025_104 106001 106480 + 3.D.1.5.1
TC ShaoY_2019_ERR3405919_bin.15_k141_28025 ShaoY_2019_ERR3405919_bin.15_k141_28025_105 106477 108351 + 3.D.1.5.1
STP ShaoY_2019_ERR3405919_bin.15_k141_28025 ShaoY_2019_ERR3405919_bin.15_k141_28025_106 108363 110051 + Fer4 | Fer4
TC ShaoY_2019_ERR3405919_bin.15_k141_28025 ShaoY_2019_ERR3405919_bin.15_k141_28025_107 110198 110785 - 3.A.1.6.1
TC ShaoY_2019_ERR3405919_bin.15_k141_28025 ShaoY_2019_ERR3405919_bin.15_k141_28025_108 110788 111546 - 3.A.1.17.5
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_28025_102
Type: TC
Location: 102584 - 103489 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_28025_103
Type: CAZyme
Location: 103486 - 105777 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_28025_104
Type: TC
Location: 106001 - 106480 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_28025_105
Type: TC
Location: 106477 - 108351 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_28025_106
Type: STP
Location: 108363 - 110051 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_28025_107
Type: TC
Location: 110198 - 110785 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_28025_108
Type: TC
Location: 110788 - 111546 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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