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Cluster: ShaoY_2019_ERR3405919_bin.15_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405919_bin.15_k141_26376 ShaoY_2019_ERR3405919_bin.15_k141_26376_14 15091 15960 + 1.A.35.3.2
TC ShaoY_2019_ERR3405919_bin.15_k141_26376 ShaoY_2019_ERR3405919_bin.15_k141_26376_15 16022 16546 + 9.B.156.3.1
NULL(UNKNOWN) ShaoY_2019_ERR3405919_bin.15_k141_26376 ShaoY_2019_ERR3405919_bin.15_k141_26376_16 16617 17240 + NULL(UNKNOWN)
[View Structural Homologs]
pfam ShaoY_2019_ERR3405919_bin.15_k141_26376 ShaoY_2019_ERR3405919_bin.15_k141_26376_17 17316 17888 + PTAC
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_26376 ShaoY_2019_ERR3405919_bin.15_k141_26376_18 17962 18723 - CE4
STP ShaoY_2019_ERR3405919_bin.15_k141_26376 ShaoY_2019_ERR3405919_bin.15_k141_26376_19 18876 21740 + BTAD
pfam ShaoY_2019_ERR3405919_bin.15_k141_26376 ShaoY_2019_ERR3405919_bin.15_k141_26376_20 21865 23400 + Lyase_aromatic
TC ShaoY_2019_ERR3405919_bin.15_k141_26376 ShaoY_2019_ERR3405919_bin.15_k141_26376_21 23493 24812 + 2.A.8.1.12
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_26376_14
Type: TC
Location: 15091 - 15960 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_26376_15
Type: TC
Location: 16022 - 16546 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_26376_16
Type:
Location: 16617 - 17240 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_26376_17
Type: pfam
Location: 17316 - 17888 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_26376_18
Type: CAZyme
Location: 17962 - 18723 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_26376_19
Type: STP
Location: 18876 - 21740 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_26376_20
Type: pfam
Location: 21865 - 23400 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_26376_21
Type: TC
Location: 23493 - 24812 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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