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Cluster: ShaoY_2019_ERR3405919_bin.15_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405919_bin.15_k141_21738 ShaoY_2019_ERR3405919_bin.15_k141_21738_29 34543 34956 + 2.A.7.2.1
pfam ShaoY_2019_ERR3405919_bin.15_k141_21738 ShaoY_2019_ERR3405919_bin.15_k141_21738_30 35045 35668 + G3P_acyltransf
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_21738 ShaoY_2019_ERR3405919_bin.15_k141_21738_31 35665 36783 + GT28
TF ShaoY_2019_ERR3405919_bin.15_k141_21738 ShaoY_2019_ERR3405919_bin.15_k141_21738_32 36922 37374 + MarR
TC ShaoY_2019_ERR3405919_bin.15_k141_21738 ShaoY_2019_ERR3405919_bin.15_k141_21738_33 37377 38747 + 2.A.66.1.32
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_21738_29
Type: TC
Location: 34543 - 34956 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_21738_30
Type: pfam
Location: 35045 - 35668 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_21738_31
Type: CAZyme
Location: 35665 - 36783 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_21738_32
Type: TF
Location: 36922 - 37374 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_21738_33
Type: TC
Location: 37377 - 38747 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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