dbCAN HGM

Cluster: ShaoY_2019_ERR3405919_bin.15_CGC22

Cluster Details
Gene Composition
Taxonomic Lineage
Gene level Read Mapping
Explore Read Mapping

🧬 Cluster Details

Gene Count: 13
CAZyme Count: 1
Substrate:
Genome ID: ShaoY_2019_ERR3405919_bin.15
Continent: Europe
Source Study: Zeng et al., 2022 →

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_11	7810	8565	+	3.A.1.134.12
TC	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_12	8562	10478	+	3.A.1.134.5
pfam	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_13	10574	16552	-	Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Big_2 \| Big_2 \| Big_2 \| LRR_5 \| LRR_5 \| LRR_5 \| LRR_5 \| LRR_5 \| LRR_5 \| LRR_5 \| LRR_5 \| LRR_5 \| LRR_5 \| LRR_5 \| Choline_bind_2 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Big-like
pfam	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_14	16849	17253	+	DUF454
TC	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_15	17271	19013	+	3.A.1.106.12
TC	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_16	19010	20659	+	3.A.1.106.11
TC	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_17	20824	21420	-	2.A.115.2.14
pfam	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_18	21655	23211	+	LytR_cpsA_psr
NULL(UNKNOWN)	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_19	23249	23392	+	NULL(UNKNOWN) [View Structural Homologs]
TC	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_20	23629	25245	+	2.A.35.2.1
CAZyme	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_21	25373	27538	+	GH112
TF	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_22	27568	28401	-	HTH_AraC \| HTH_AraC
TC	ShaoY_2019_ERR3405919_bin.15_k141_19961	ShaoY_2019_ERR3405919_bin.15_k141_19961_23	28394	29764	-	2.A.66.1.32

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_11
Type: TC
Location: 7810 - 8565 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_12
Type: TC
Location: 8562 - 10478 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_13
Type: pfam
Location: 10574 - 16552 (-)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_14
Type: pfam
Location: 16849 - 17253 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_15
Type: TC
Location: 17271 - 19013 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_16
Type: TC
Location: 19010 - 20659 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_17
Type: TC
Location: 20824 - 21420 (-)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_18
Type: pfam
Location: 21655 - 23211 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_19
Type:
Location: 23249 - 23392 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_20
Type: TC
Location: 23629 - 25245 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_21
Type: CAZyme
Location: 25373 - 27538 (+)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_22
Type: TF
Location: 27568 - 28401 (-)

Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_19961_23
Type: TC
Location: 28394 - 29764 (-)

Taxonomic Lineage

Domain

Bacteria

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Phylum

Bacillota_A

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Class

Clostridia

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Order

Lachnospirales

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Family

Lachnospiraceae

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Genus

Blautia

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Species

Blautia sp900555025

Gene Level Read Mapping

Diet (De Filippis et al., 2019)
Diet (Huang et al., 2024)
IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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