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Cluster: ShaoY_2019_ERR3405919_bin.15_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_36 38800 40131 - 2.A.66.1.33
pfam ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_37 40271 45607 - FIVAR | Cadherin-like | DUF4430
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_38 46170 48632 - GT35
pfam ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_39 48654 51797 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
TC ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_40 52185 53666 - 8.A.3.3.4
TC ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_41 53688 55121 - 8.A.3.1.2
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_36
Type: TC
Location: 38800 - 40131 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_37
Type: pfam
Location: 40271 - 45607 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_38
Type: CAZyme
Location: 46170 - 48632 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_39
Type: pfam
Location: 48654 - 51797 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_40
Type: TC
Location: 52185 - 53666 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_41
Type: TC
Location: 53688 - 55121 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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