dbCAN Logo

Cluster: ShaoY_2019_ERR3405919_bin.15_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_1 2 2230 - 9.A.8.1.6
TC ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_2 2372 4258 - 3.A.3.6.10
STP ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_3 4328 4546 - HMA
TC ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_4 4661 6853 - 9.B.74.1.1
TC ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_5 6850 9393 - 9.B.74.1.1
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_15422 ShaoY_2019_ERR3405919_bin.15_k141_15422_6 9611 10972 - GH13_20
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_1
Type: TC
Location: 2 - 2230 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_2
Type: TC
Location: 2372 - 4258 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_3
Type: STP
Location: 4328 - 4546 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_4
Type: TC
Location: 4661 - 6853 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_5
Type: TC
Location: 6850 - 9393 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_15422_6
Type: CAZyme
Location: 9611 - 10972 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List