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Cluster: ShaoY_2019_ERR3405919_bin.15_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_9 10108 11736 - GH13_31
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_10 11738 13495 - CBM34 | GH13_20
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_11 13507 14775 - GH77
NULL(UNKNOWN) ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_12 14733 14891 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_13 14905 17166 - GT35
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_14 17186 19159 - GH133
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_15 19177 21132 - GH13_14
TC ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_16 21151 22023 - 3.A.1.1.27
TC ShaoY_2019_ERR3405919_bin.15_k141_14825 ShaoY_2019_ERR3405919_bin.15_k141_14825_17 22026 23405 - 3.A.1.1.27
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_9
Type: CAZyme
Location: 10108 - 11736 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_10
Type: CAZyme
Location: 11738 - 13495 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_11
Type: CAZyme
Location: 13507 - 14775 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_12
Type:
Location: 14733 - 14891 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_13
Type: CAZyme
Location: 14905 - 17166 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_14
Type: CAZyme
Location: 17186 - 19159 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_15
Type: CAZyme
Location: 19177 - 21132 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_16
Type: TC
Location: 21151 - 22023 (-)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_14825_17
Type: TC
Location: 22026 - 23405 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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