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Cluster: ShaoY_2019_ERR3405919_bin.15_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405919_bin.15_k141_5065 ShaoY_2019_ERR3405919_bin.15_k141_5065_12 15000 16253 + 3.A.1.122.2
pfam ShaoY_2019_ERR3405919_bin.15_k141_5065 ShaoY_2019_ERR3405919_bin.15_k141_5065_13 16377 17255 + DegV
pfam ShaoY_2019_ERR3405919_bin.15_k141_5065 ShaoY_2019_ERR3405919_bin.15_k141_5065_14 17263 19029 + tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1
CAZyme ShaoY_2019_ERR3405919_bin.15_k141_5065 ShaoY_2019_ERR3405919_bin.15_k141_5065_15 19237 26166 + GH101
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_5065_12
Type: TC
Location: 15000 - 16253 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_5065_13
Type: pfam
Location: 16377 - 17255 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_5065_14
Type: pfam
Location: 17263 - 19029 (+)
Gene ID: ShaoY_2019_ERR3405919_bin.15_k141_5065_15
Type: CAZyme
Location: 19237 - 26166 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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