Cluster: ShaoY_2019_ERR3405909_bin.4_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405909_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405909_bin.4_k141_5075 | ShaoY_2019_ERR3405909_bin.4_k141_5075_8 | 7729 | 9183 | + | GH32 |
| pfam | ShaoY_2019_ERR3405909_bin.4_k141_5075 | ShaoY_2019_ERR3405909_bin.4_k141_5075_9 | 9193 | 9810 | + | Y_phosphatase | DSPc | Y_phosphatase2 | Y_phosphatase3 | PTP-NADK | Tc-R-P |
| TC | ShaoY_2019_ERR3405909_bin.4_k141_5075 | ShaoY_2019_ERR3405909_bin.4_k141_5075_10 | 9887 | 11059 | + | 2.A.1.20.4 |
Gene ID: ShaoY_2019_ERR3405909_bin.4_k141_5075_8
Type: CAZyme
Location: 7729 - 9183 (+)
Type: CAZyme
Location: 7729 - 9183 (+)
Gene ID: ShaoY_2019_ERR3405909_bin.4_k141_5075_9
Type: pfam
Location: 9193 - 9810 (+)
Type: pfam
Location: 9193 - 9810 (+)
Gene ID: ShaoY_2019_ERR3405909_bin.4_k141_5075_10
Type: TC
Location: 9887 - 11059 (+)
Type: TC
Location: 9887 - 11059 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.