Cluster: ShaoY_2019_ERR3405909_bin.4_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405909_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405909_bin.4_k141_14400 | ShaoY_2019_ERR3405909_bin.4_k141_14400_3 | 1805 | 3526 | - | PL1 |
| STP | ShaoY_2019_ERR3405909_bin.4_k141_14400 | ShaoY_2019_ERR3405909_bin.4_k141_14400_4 | 3761 | 4168 | + | Glyoxalase |
| pfam | ShaoY_2019_ERR3405909_bin.4_k141_14400 | ShaoY_2019_ERR3405909_bin.4_k141_14400_5 | 4179 | 4868 | + | RNase_T |
| TC | ShaoY_2019_ERR3405909_bin.4_k141_14400 | ShaoY_2019_ERR3405909_bin.4_k141_14400_6 | 5216 | 6568 | + | 2.A.8.1.12 |
Gene ID: ShaoY_2019_ERR3405909_bin.4_k141_14400_3
Type: CAZyme
Location: 1805 - 3526 (-)
Type: CAZyme
Location: 1805 - 3526 (-)
Gene ID: ShaoY_2019_ERR3405909_bin.4_k141_14400_4
Type: STP
Location: 3761 - 4168 (+)
Type: STP
Location: 3761 - 4168 (+)
Gene ID: ShaoY_2019_ERR3405909_bin.4_k141_14400_5
Type: pfam
Location: 4179 - 4868 (+)
Type: pfam
Location: 4179 - 4868 (+)
Gene ID: ShaoY_2019_ERR3405909_bin.4_k141_14400_6
Type: TC
Location: 5216 - 6568 (+)
Type: TC
Location: 5216 - 6568 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.