Cluster: ShaoY_2019_ERR3405906_bin.7_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405906_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405906_bin.7_k141_3341 | ShaoY_2019_ERR3405906_bin.7_k141_3341_7 | 4643 | 5353 | + | 1.C.82.1.1 |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_3341 | ShaoY_2019_ERR3405906_bin.7_k141_3341_8 | 5528 | 6034 | + | Ribosomal_L10 |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_3341 | ShaoY_2019_ERR3405906_bin.7_k141_3341_9 | 6105 | 6473 | + | Ribosomal_L12 | Ribosomal_L12_N |
| CAZyme | ShaoY_2019_ERR3405906_bin.7_k141_3341 | ShaoY_2019_ERR3405906_bin.7_k141_3341_10 | 6589 | 8067 | - | GT83 |
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_3341_7
Type: TC
Location: 4643 - 5353 (+)
Type: TC
Location: 4643 - 5353 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_3341_8
Type: pfam
Location: 5528 - 6034 (+)
Type: pfam
Location: 5528 - 6034 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_3341_9
Type: pfam
Location: 6105 - 6473 (+)
Type: pfam
Location: 6105 - 6473 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_3341_10
Type: CAZyme
Location: 6589 - 8067 (-)
Type: CAZyme
Location: 6589 - 8067 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp934230905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.