Cluster: ShaoY_2019_ERR3405906_bin.7_CGC8
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405906_bin.7
- CGC Family ID: CGCFAM_01745
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_62 | 65645 | 67363 | + | 3.D.10.1.4 |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_63 | 67365 | 68327 | + | Fer2_3 | Fer4_8 | Fer4_9 | Fer4_17 |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_64 | 68327 | 69202 | + | 3.D.10.1.4 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_65 | 69370 | 70116 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_66 | 70301 | 70894 | + | 9.B.27.2.5 |
| CAZyme | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_67 | 70905 | 72542 | + | GT83 |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_68 | 72848 | 73801 | + | 3.A.1.17.4 |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_69 | 73812 | 74564 | + | 3.A.1.17.1 |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_2997 | ShaoY_2019_ERR3405906_bin.7_k141_2997_70 | 74576 | 75349 | + | 3.A.1.16.3 |
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_62
Type: TC
Location: 65645 - 67363 (+)
Type: TC
Location: 65645 - 67363 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_63
Type: pfam
Location: 67365 - 68327 (+)
Type: pfam
Location: 67365 - 68327 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_64
Type: TC
Location: 68327 - 69202 (+)
Type: TC
Location: 68327 - 69202 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_65
Type:
Location: 69370 - 70116 (+)
Type:
Location: 69370 - 70116 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_66
Type: TC
Location: 70301 - 70894 (+)
Type: TC
Location: 70301 - 70894 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_67
Type: CAZyme
Location: 70905 - 72542 (+)
Type: CAZyme
Location: 70905 - 72542 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_68
Type: TC
Location: 72848 - 73801 (+)
Type: TC
Location: 72848 - 73801 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_69
Type: TC
Location: 73812 - 74564 (+)
Type: TC
Location: 73812 - 74564 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2997_70
Type: TC
Location: 74576 - 75349 (+)
Type: TC
Location: 74576 - 75349 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp934230905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.