Cluster: ShaoY_2019_ERR3405906_bin.7_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405906_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405906_bin.7_k141_2302 | ShaoY_2019_ERR3405906_bin.7_k141_2302_53 | 58662 | 59648 | + | 9.B.146.1.6 |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_2302 | ShaoY_2019_ERR3405906_bin.7_k141_2302_54 | 59776 | 61140 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | ShaoY_2019_ERR3405906_bin.7_k141_2302 | ShaoY_2019_ERR3405906_bin.7_k141_2302_55 | 61145 | 62254 | + | GT28 |
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2302_53
Type: TC
Location: 58662 - 59648 (+)
Type: TC
Location: 58662 - 59648 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2302_54
Type: pfam
Location: 59776 - 61140 (+)
Type: pfam
Location: 59776 - 61140 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_2302_55
Type: CAZyme
Location: 61145 - 62254 (+)
Type: CAZyme
Location: 61145 - 62254 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp934230905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.