Cluster: ShaoY_2019_ERR3405906_bin.7_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405906_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405906_bin.7_k141_857 | ShaoY_2019_ERR3405906_bin.7_k141_857_30 | 34093 | 35712 | - | GH18 |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_857 | ShaoY_2019_ERR3405906_bin.7_k141_857_31 | 35845 | 36672 | + | LGT |
| STP | ShaoY_2019_ERR3405906_bin.7_k141_857 | ShaoY_2019_ERR3405906_bin.7_k141_857_32 | 36773 | 38089 | - | Pyr_redox_2 |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_857 | ShaoY_2019_ERR3405906_bin.7_k141_857_33 | 38082 | 40400 | - | 3.A.7.7.1 |
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_857_30
Type: CAZyme
Location: 34093 - 35712 (-)
Type: CAZyme
Location: 34093 - 35712 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_857_31
Type: pfam
Location: 35845 - 36672 (+)
Type: pfam
Location: 35845 - 36672 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_857_32
Type: STP
Location: 36773 - 38089 (-)
Type: STP
Location: 36773 - 38089 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_857_33
Type: TC
Location: 38082 - 40400 (-)
Type: TC
Location: 38082 - 40400 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp934230905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.