Cluster: ShaoY_2019_ERR3405906_bin.7_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405906_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405906_bin.7_k141_676 | ShaoY_2019_ERR3405906_bin.7_k141_676_119 | 126617 | 130156 | - | 3.A.1.129.1 |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_676 | ShaoY_2019_ERR3405906_bin.7_k141_676_120 | 130283 | 131302 | - | 3.D.4.3.2 |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_676 | ShaoY_2019_ERR3405906_bin.7_k141_676_121 | 131293 | 132681 | - | 3.D.4.3.2 |
| TF | ShaoY_2019_ERR3405906_bin.7_k141_676 | ShaoY_2019_ERR3405906_bin.7_k141_676_122 | 132739 | 133191 | - | Rrf2 |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_676 | ShaoY_2019_ERR3405906_bin.7_k141_676_123 | 133363 | 134361 | - | 2.A.20.1.5 |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_676 | ShaoY_2019_ERR3405906_bin.7_k141_676_124 | 134354 | 134983 | - | PhoU_div |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_676 | ShaoY_2019_ERR3405906_bin.7_k141_676_125 | 135062 | 135556 | - | MoCF_biosynth |
| CAZyme | ShaoY_2019_ERR3405906_bin.7_k141_676 | ShaoY_2019_ERR3405906_bin.7_k141_676_126 | 135565 | 136416 | - | CE4 |
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_676_119
Type: TC
Location: 126617 - 130156 (-)
Type: TC
Location: 126617 - 130156 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_676_120
Type: TC
Location: 130283 - 131302 (-)
Type: TC
Location: 130283 - 131302 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_676_121
Type: TC
Location: 131293 - 132681 (-)
Type: TC
Location: 131293 - 132681 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_676_122
Type: TF
Location: 132739 - 133191 (-)
Type: TF
Location: 132739 - 133191 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_676_123
Type: TC
Location: 133363 - 134361 (-)
Type: TC
Location: 133363 - 134361 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_676_124
Type: pfam
Location: 134354 - 134983 (-)
Type: pfam
Location: 134354 - 134983 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_676_125
Type: pfam
Location: 135062 - 135556 (-)
Type: pfam
Location: 135062 - 135556 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_676_126
Type: CAZyme
Location: 135565 - 136416 (-)
Type: CAZyme
Location: 135565 - 136416 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp934230905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.