Cluster: ShaoY_2019_ERR3405906_bin.7_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405906_bin.7
- CGC Family ID: CGCFAM_00056
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405906_bin.7_k141_4545 | ShaoY_2019_ERR3405906_bin.7_k141_4545_9 | 7294 | 8115 | + | 3.A.1.24.5 |
| TF | ShaoY_2019_ERR3405906_bin.7_k141_4545 | ShaoY_2019_ERR3405906_bin.7_k141_4545_10 | 8183 | 8902 | - | Trans_reg_C |
| STP | ShaoY_2019_ERR3405906_bin.7_k141_4545 | ShaoY_2019_ERR3405906_bin.7_k141_4545_11 | 8906 | 10390 | - | HATPase_c | HisKA |
| CAZyme | ShaoY_2019_ERR3405906_bin.7_k141_4545 | ShaoY_2019_ERR3405906_bin.7_k141_4545_12 | 10567 | 12036 | + | GT83 |
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_9
Type: TC
Location: 7294 - 8115 (+)
Type: TC
Location: 7294 - 8115 (+)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_10
Type: TF
Location: 8183 - 8902 (-)
Type: TF
Location: 8183 - 8902 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_11
Type: STP
Location: 8906 - 10390 (-)
Type: STP
Location: 8906 - 10390 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_12
Type: CAZyme
Location: 10567 - 12036 (+)
Type: CAZyme
Location: 10567 - 12036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp934230905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.