Cluster: ShaoY_2019_ERR3405906_bin.7_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405906_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405906_bin.7_k141_434 | ShaoY_2019_ERR3405906_bin.7_k141_434_1 | 164 | 1318 | - | GT28 |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_434 | ShaoY_2019_ERR3405906_bin.7_k141_434_2 | 1417 | 1716 | - | Bac_DNA_binding | HU-HIG |
| pfam | ShaoY_2019_ERR3405906_bin.7_k141_434 | ShaoY_2019_ERR3405906_bin.7_k141_434_3 | 1769 | 2548 | - | MazG | MazG |
| TC | ShaoY_2019_ERR3405906_bin.7_k141_434 | ShaoY_2019_ERR3405906_bin.7_k141_434_4 | 2532 | 4136 | - | 2.A.66.2.14 |
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_434_1
Type: CAZyme
Location: 164 - 1318 (-)
Type: CAZyme
Location: 164 - 1318 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_434_2
Type: pfam
Location: 1417 - 1716 (-)
Type: pfam
Location: 1417 - 1716 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_434_3
Type: pfam
Location: 1769 - 2548 (-)
Type: pfam
Location: 1769 - 2548 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_434_4
Type: TC
Location: 2532 - 4136 (-)
Type: TC
Location: 2532 - 4136 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp934230905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.