Cluster: ShaoY_2019_ERR3405884_bin.3_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405884_bin.3
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405884_bin.3_k141_8948 | ShaoY_2019_ERR3405884_bin.3_k141_8948_50 | 48501 | 49472 | + | 9.B.146.1.6 |
| pfam | ShaoY_2019_ERR3405884_bin.3_k141_8948 | ShaoY_2019_ERR3405884_bin.3_k141_8948_51 | 49504 | 50880 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | ShaoY_2019_ERR3405884_bin.3_k141_8948 | ShaoY_2019_ERR3405884_bin.3_k141_8948_52 | 50880 | 51986 | + | GT28 |
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_8948_50
Type: TC
Location: 48501 - 49472 (+)
Type: TC
Location: 48501 - 49472 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_8948_51
Type: pfam
Location: 49504 - 50880 (+)
Type: pfam
Location: 49504 - 50880 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_8948_52
Type: CAZyme
Location: 50880 - 51986 (+)
Type: CAZyme
Location: 50880 - 51986 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
CAMBIX01
Species
CAMBIX01 sp945867815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.